飼料添加物ではなく鶏の日齢が抗菌薬耐性遺伝子に影響(Age, not feed additives, affects antimicrobial resistance genes in chickens)

2026-09-25 ペンシルベニア州立大学(Penn State)

ペンシルベニア州立大学(Penn State)の研究チームは、ブロイラー(肉用鶏)の腸内に存在する抗菌薬耐性遺伝子(レジストーム)について、飼料添加物よりも鶏の日齢が大きな影響を与えることを明らかにした。320羽を、無添加、抗菌薬、精油、プロバイオティクスの4群に分け、1・10・21日齢で糞便を採取し、ショットガン・メタゲノム解析を実施した結果、823種類の耐性遺伝子を検出した。抗菌薬、プロバイオティクス、精油によるレジストーム全体の多様性への持続的な影響は確認されなかった一方、日齢による変化は明瞭だった。これは成長に伴う腸内細菌叢の「微生物群集遷移」により、保有する耐性遺伝子の構成が自然に変化するためと考えられる。ただし、本研究は特定条件下の結果であり、飼料添加物が耐性に影響しないことを意味するものではない。また、遺伝子配列の検出だけでは、実際の細菌の耐性や遺伝子発現までは判断できない。

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ブロイラー鶏の耐性遺伝子群に対する食事介入の影響の評価 Assessing the impact of dietary interventions on the resistomes of broiler chickens

Ana Fonseca, Sophia Kenney, Stephanie Bierly, John Boney, Erika Ganda
Poultry Science  Available online: 30 June 2026
DOI:https://doi.org/10.1016/j.psj.2026.107343

飼料添加物ではなく鶏の日齢が抗菌薬耐性遺伝子に影響(Age, not feed additives, affects antimicrobial resistance genes in chickens)

Abstract

Antimicrobial resistance (AMR) is a major One Health concern, and while natural feed additives such as probiotics and phytotherapeutics are increasingly used as alternatives to antimicrobial growth promoters (AGPs) in poultry production, their potential effects on the selection of antibiotic resistance genes remain poorly understood. Therefore, our objective was to characterize the effects of a probiotic and an essential oils blend on the broiler resistome. Cobb 500 1-day-old chicks (N=320) were randomly allocated in 32 cages, with eight replicates of ten broilers per cage per treatment and were raised until day 21. Treatments consisted of four diets: a basal diet (negative control), a basal diet with Bacitracin Methylene Disalicylate (BMD) at 50 g/ton, a basal diet with an essential oil blend at 100 g/ton, and a basal diet with a probiotic (Bacillus subtilis) at 226.8 g/ton. Excreta samples were collected at three-time points (1, 10, and 21 days) to characterize broilers’ resistome. The DNA extracted from these samples was sequenced using shotgun metagenomics on the NovaSeq platform and statistical analyses were done using Kruskal-Wallis and PERMANOVA to assess gene diversity. Across all samples, 823 unique ARGs were identified. These genes spanned a broad spectrum of classes, including multi-compound, metals, drugs, and biocides resistance. No significant differences in alpha diversity of these genes (P = 0.51) were observed between treatment groups; however, AMR gene diversity varied by age (P < 0.001). A statistically significant difference was observed in beta diversity across ages (P = 0.001), but not between treatments (P = 0.95). While age impacted AMR gene diversity, under our experimental conditions, antibiotics or other in-feed additives did not significantly alter broiler resistomes. This study advances poultry AMR surveillance by demonstrating that resistome diversity and composition in broiler chickens are predominantly shaped by age-dependent microbial succession, while neither in-feed antibiotics nor non-antibiotic feed additives induced persistent or treatment-specific alterations in ARG profiles under the conditions tested.

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